Search by RBP
Filter the database for specific RBP
Select an RBP to get the details of all transcripts with putative motif instances above a specified threshold.
Select a treshold for motif matching. The percentile of motif score serves as a homogenized treshold to detect degenerated moifs. A treshold of 99 percentile selects only the highest scored motifs, while a treshold of 50 percentile allows more mismatches while maintaining good correlation with in vitro binding assays. The upper limit of 99 accommodates canonical motifs that permit slight sequence variation at specific positions. Please see our previous publication for more details.
Due to potential high row count of the motif instances, the full instance will not be displayed. A download link of the csv is still offered, with the total number of rows to help verifying the completeness of file.